Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ35614.1PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: nhl:Nhal_0904 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
EIJ35615.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate:AMP phosphotransferase; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.562
EIJ35616.1
Prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR005944:IPR000073; KEGG: tgr:Tgr7_0208 proline iminopeptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1.
       0.562
EIJ35617.1
PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: slt:Slit_1775 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase.
       0.562
EIJ35148.1
PFAM: SEFIR domain; InterPro IPR019734:IPR013568; KEGG: hhy:Halhy_4424 WD repeat-containing protein; PFAM: SEFIR; SPTR: WD repeat-containing protein.
  
     0.532
EIJ33133.1
KEGG: syn:sll0925 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.479
EIJ34205.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: azl:AZL_001120 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.476
EIJ34232.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: alv:Alvin_2535 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.420
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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