Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ35638.1KEGG: slt:Slit_0098 hypothetical protein; SPTR: Putative uncharacterized protein. (231 aa)    
Predicted Functional Partners:
EIJ36265.1
PFAM: Cas6 Crispr; TIGRFAM: CRISPR-associated protein Cas6, subtype MYXAN; InterPro IPR014174; KEGG: tgr:Tgr7_2182 hypothetical protein; PFAM: CRISPR-associated protein, Cas6-related; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Cas6-related.
 
     0.782
EIJ32817.1
KEGG: slt:Slit_1667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
EIJ33044.1
KEGG: tbd:Tbd_0600 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
EIJ33926.1
PFAM: Hpt domain; InterPro IPR008207; KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SPTR: Hpt domain protein.
    
 0.773
EIJ35872.1
KEGG: bbe:BBR47_17350 hypothetical protein; SPTR: Kinesin, putative.
 
   0.771
EIJ32819.1
KEGG: tgr:Tgr7_2284 hypothetical protein; SPTR: Protein involved in sulfur oxidation dsrS.
  
     0.768
EIJ36417.1
Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein htpG; InterPro IPR003594:IPR001404:IPR020576; KEGG: afr:AFE_3158 heat shock protein HtpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Molecular chaperone HSP90 family.
   
  0.758
EIJ33924.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013767:IPR003661:IPR003594:IPR 001789; KEGG: ami:Amir_2370 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; Signal transduction response regulator, receiver region; SMART: Signal t [...]
   
 0.749
EIJ34499.1
KEGG: alv:Alvin_1495 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
EIJ33942.1
Integral membrane sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: geb:GM18_3186 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-bin [...]
    
 0.746
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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