Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ35688.1Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mgm:Mmc1_3249 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein. (1261 aa)    
Predicted Functional Partners:
EIJ35687.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: alv:Alvin_1764 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
 
  0.981
EIJ33148.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR000089:IPR006143; KEGG: tgr:Tgr7_1128 efflux transporter RND family, MFP subunit; PFAM: Biotin/lipoyl attachment; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
 
  0.969
EIJ32774.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: alv:Alvin_1764 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
 
  0.945
EIJ32949.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: alv:Alvin_1764 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
 
  0.945
EIJ33060.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dia:Dtpsy_3372 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
  
  0.873
EIJ36705.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rce:RC1_3899 acriflavine resistance protein E; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; manually curated.
  
  0.862
EIJ34676.1
PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010130; KEGG: tgr:Tgr7_0483 type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; SPTR: Type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC.
  
 0.844
EIJ35476.1
PFAM: Protein of unknown function (DUF2892); KEGG: din:Selin_1132 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.757
EIJ33753.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dia:Dtpsy_2314 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD.
  
  0.720
EIJ36499.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: eba:ebA1649 putative RND efflux membrane fusion protein precursor; PFAM: Secretion protein HlyD; SPTR: Putative RND efflux membrane fusion protein; TIGRFAM: Secretion protein HlyD.
  
  0.719
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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