STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ35720.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
EIJ35719.1
PFAM: Phage capsid scaffolding protein (GPO) serine peptidase; InterPro IPR009228; KEGG: rah:Rahaq_1478 capsid scaffolding; PFAM: Phage capsid scaffolding; SPTR: Capsid scaffolding.
       0.472
EIJ35717.1
PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; InterPro IPR006441; KEGG: adn:Alide_1282 phage major capsid protein, p2 family; PFAM: Phage major capsid protein, P2; SPTR: Gp33; TIGRFAM: Phage major capsid protein, P2.
       0.443
EIJ35718.1
PFAM: Phage small terminase subunit; InterPro IPR010270; KEGG: bgl:bglu_1g01450 hypothetical protein; PFAM: Phage small terminase subunit; SPTR: Putative uncharacterized protein.
       0.443
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.