STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ35749.1PFAM: Protein of unknown function (DUF2782). (99 aa)    
Predicted Functional Partners:
EIJ35748.1
Homoserine kinase; PFAM: SirA-like protein; Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; COGs: COG2334 Putative homoserine kinase type II (protein kinase fold); HAMAP: Homoserine kinase; InterPro IPR002575:IPR001455:IPR005280; KEGG: mei:Msip34_0391 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; SirA-like; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase ThrB.
       0.792
EIJ35750.1
Hypothetical protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: tgr:Tgr7_0086 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00730; Belongs to the LOG family.
       0.792
EIJ35747.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: tgr:Tgr7_3258 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein.
       0.784
EIJ35751.1
PFAM: BolA-like protein; COGs: COG5007 transcriptional regulator BolA superfamily protein; InterPro IPR002634; KEGG: tgr:Tgr7_2690 BolA family protein; PFAM: BolA-like protein; SPTR: BolA-like protein.
       0.673
EIJ35752.1
PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: tgr:Tgr7_2686 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family.
       0.468
EIJ35746.1
PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: pin:Ping_3485 glutamine synthetase, type III; PFAM: Glutamine synthetase, catalytic region; SPTR: Glutamate--ammonia ligase.
       0.452
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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