Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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EIJ36036.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681:IPR010656; KEGG: pnu:Pnuc_0653 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit. (529 aa)    
Predicted Functional Partners:
EIJ36037.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: cti:RALTA_A2408 tripartite ATP-independent periplasmic (trap-type) mannitol/chloroaromatic compound transporter, small permease; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Putative Tripartite ATP-independent periplasmic (TRAP-type) mannitol/chloroaromatic compound transport system, small permease component.
 
 
 0.982
EIJ33912.1
PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR006311:IPR018389; KEGG: pne:Pnec_1273 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.844
EIJ34999.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: saz:Sama_2211 C4-dicarboxylate transport protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP-type C4-dicarboxylate transport system large permease component; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
  
  
 
0.832
EIJ34998.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: ppr:PBPRB1888 C4-dicarboxylate transporter, small permease component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: TRAP-type C4-dicarboxylate transport system small permease component.
 
  
  0.740
EIJ34997.1
TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: alv:Alvin_1063 TRAP dicarboxylate transporter subunit DctP; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit.
 
   
 0.554
EIJ36038.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tbd:Tbd_0142 secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD.
       0.413
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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