STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36038.1TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tbd:Tbd_0142 secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD. (351 aa)    
Predicted Functional Partners:
EIJ33913.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: tbd:Tbd_0143 heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA.
  
 0.878
EIJ36049.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: alv:Alvin_1523 CzcA family heavy metal efflux pump; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA.
  
 0.801
EIJ34676.1
PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010130; KEGG: tgr:Tgr7_0483 type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; SPTR: Type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC.
 
 0.792
EIJ33059.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: lch:Lcho_3964 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein.
  
  0.621
EIJ36498.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: pae:PA3676 Resistance-Nodulation-cell Division (RND) efflux transporter; PFAM: Acriflavin resistance protein; SPTR: Probable Resistance-Nodulation-Cell Division (RND) efflux transporter.
  
  0.621
EIJ32859.1
Hypothetical protein; KEGG: tgr:Tgr7_0317 outer membrane efflux protein; SPTR: Outer membrane efflux protein.
  
  0.605
EIJ36120.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: nhl:Nhal_3255 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein.
  
  0.585
EIJ33102.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: cps:CPS_4648 AcrB/AcrD/AcrF family protein; PFAM: Acriflavin resistance protein; SPTR: Putative multidrug resistance protein (AcrB/AcrD/AcrF family).
  
  0.580
EIJ33147.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tgr:Tgr7_1129 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.576
EIJ36050.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: alv:Alvin_1522 RND family efflux transporter MFP subunit; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD.
  
     0.570
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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