STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36051.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
EIJ36050.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: alv:Alvin_1522 RND family efflux transporter MFP subunit; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD.
       0.547
EIJ36049.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: alv:Alvin_1523 CzcA family heavy metal efflux pump; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA.
       0.543
EIJ36052.1
PFAM: Hpt domain; InterPro IPR008207; KEGG: cja:CJA_2461 putative sensor/response hybrid; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SPTR: Probable sensor/response hybrid.
       0.476
EIJ36053.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: tel:tll1282 two-component hybrid sensor and regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor [...]
       0.456
EIJ36054.1
Integral membrane sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: tel:tll1282 two-component hybrid sensor and regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidin [...]
       0.443
EIJ36055.1
PFAM: Ethylbenzene dehydrogenase; InterPro IPR019020; KEGG: sfu:Sfum_0444 hypothetical protein; PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain; SPTR: Putative uncharacterized protein.
       0.427
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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