STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36060.1PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; COGs: COG2161 Antitoxin of toxin-antitoxin stability system; InterPro IPR006442:IPR003756; KEGG: xne:XNC1_3746 Antitoxin YefM; SPTR: Prevent-host-death protein; TIGRFAM: Prevent-host-death protein. (85 aa)    
Predicted Functional Partners:
EIJ36059.1
Addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: cyt:cce_4261 putative addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin, Txe/YoeB; SPTR: Addiction module toxin, Txe/YoeB; TIGRFAM: Addiction module toxin, Txe/YoeB.
 
 
 0.993
EIJ36671.1
Addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: yps:pYptb0009 hypothetical protein; PFAM: Addiction module toxin, Txe/YoeB; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module toxin, Txe/YoeB.
 
 
 0.973
EIJ36057.1
KEGG: mhu:Mhun_0306 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.417
EIJ36058.1
Hypothetical protein.
       0.417
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.