STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36082.1PFAM: Phd_YefM; KEGG: cyp:PCC8801_1429 prevent-host-death family protein; SPTR: Prevent-host-death family protein. (79 aa)    
Predicted Functional Partners:
EIJ36083.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: ava:Ava_4043 PilT protein-like protein; PFAM: PilT protein, N-terminal; SPTR: PilT-like protein.
 
    0.950
EIJ37002.1
PilT protein-like protein; COGs: COG3744 conserved hypothetical protein; KEGG: mar:MAE_58010 PilT protein-like protein; SPTR: PilT protein-like protein.
 
    0.787
EIJ36084.1
KEGG: tcx:Tcr_0465 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.781
EIJ36085.1
KEGG: pna:Pnap_4408 transposase, IS4 family protein; SPTR: Transposase IS4 family protein.
       0.538
EIJ36086.1
Transposase, IS4 family protein; PFAM: Transposase DDE domain; KEGG: pna:Pnap_4408 transposase, IS4 family protein; SPTR: Transposase, IS4 family.
       0.538
EIJ36081.1
PFAM: Gram-negative porin; COGs: COG3203 Outer membrane protein (porin); InterPro IPR001702; KEGG: alv:Alvin_2899 porin gram-negative type; PFAM: Porin, Gram-negative type; SPTR: Porin.
       0.507
EIJ32911.1
PFAM: PIN domain; COGs: COG5573 nucleic-acid-binding protein contains PIN domain; KEGG: cts:Ctha_2045 PilT protein domain-containing protein; SPTR: PilT protein domain protein.
 
     0.477
EIJ36176.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG5573 nucleic-acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: cts:Ctha_2045 PilT protein domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.
 
     0.472
EIJ34533.1
PFAM: Protein of unknown function (DUF433); COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: lch:Lcho_4191 hypothetical protein; PFAM: Protein of unknown function DUF433; SPTR: Putative uncharacterized protein.
  
     0.470
EIJ34005.1
KEGG: tgr:Tgr7_0610 PilT protein-like protein; SPTR: PilT protein-like protein.
  
 
   0.462
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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