STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EIJ36107.1acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: avn:Avin_16380 acetoacetyl-CoA thiolase; SPTR: Acetoacetyl-CoA thiolase; TIGRFAM: Thiolase. (394 aa)    
Predicted Functional Partners:
EIJ34306.1
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: swi:Swit_3796 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
EIJ36108.1
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadB; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR001753:IPR006176:IPR006108; KEGG: avn:Avin_16390 multifunctional fatty acid oxidation complex subunit alpha; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; SPTR: Fatty acid oxidation complex alpha subunit FadB.
 0.999
EIJ35222.1
PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Transketolase, C-terminal domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR019752:IPR001450:IPR011766; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate [...]
  
 
 0.981
EIJ36307.1
KEGG: hau:Haur_3960 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase.
  
 
 0.971
EIJ34079.1
Protein of unknown function DUF1974; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006090:IPR015396; KEGG: nmu:Nmul_A0094 acyl-CoA dehydrogenase; PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; SPTR: Putative uncharacterized protein; manually curated.
 
 0.939
EIJ36105.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: avn:Avin_16400 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; SPTR: Acyl-CoA dehydrogenase.
 
 0.905
EIJ36488.1
Phosphotransacetylase; PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR004614:IPR010766:IPR002505; KEGG: alv:Alvin_0609 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; DRTGG; SPTR: Phosphate acetyltransferase; TIGRFAM: Phosphate acetyltransferase.
    
 0.878
EIJ34996.1
PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: aeh:Mlg_0246 malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SPTR: Allosteric NADP-dependent malic enzyme.
    
 0.853
EIJ35474.1
PFAM: Malate synthase; TIGRFAM: malate synthase G; COGs: COG2225 Malate synthase; HAMAP: Malate synthase G; InterPro IPR006253:IPR011076; KEGG: avn:Avin_05920 malate synthase G; PFAM: Malate synthase-like, core; SPTR: Malate synthase G; TIGRFAM: Malate synthase G.
   
 
 0.798
EIJ34313.1
Acetyl-coenzyme A synthetase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; HAMAP: Acetyl-coenzyme A synthetase; InterPro IPR000873:IPR011904; KEGG: tgr:Tgr7_1019 acetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Acetyl-coenzyme A synthetase; TIGRFAM: Acetate--CoA ligase.
  
 
 0.790
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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