Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
EIJ36259.1PFAM: Cytochrome b(N-terminal)/b6/petB; COGs: COG3038 Cytochrome B561; InterPro IPR011577; KEGG: tmz:Tmz1t_1861 cytochrome b561; SPTR: Cytochrome B561. (181 aa)    
Predicted Functional Partners:
EIJ35384.1
YceI family protein; PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: hch:HCH_01821 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein.
 
  
 0.676
EIJ36260.1
Hypothetical protein.
       0.449
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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