Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36566.1PFAM: XisI protein; InterPro IPR014968; KEGG: cyj:Cyan7822_5113 XisI protein; PFAM: XisI protein; SPTR: XisI protein. (97 aa)    
Predicted Functional Partners:
EIJ34001.1
KEGG: npu:Npun_F4826 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
EIJ34086.1
Hypothetical protein; Manually curated.
  
     0.733
EIJ33085.1
Hypothetical protein; PFAM: Transposase DDE domain; KEGG: osp:Odosp_1433 hypothetical protein; SPTR: Transposase, IS4 family protein; manually curated.
  
     0.730
EIJ34570.1
PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: xfa:XF1804 site-specific DNA-methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase subfamily.
  
     0.722
EIJ35951.1
Hypothetical protein; COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: taz:TREAZ_0004 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
EIJ32899.1
Nucleic acid binding protein; PFAM: Domain of unknown function (DUF3368); COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: csc:Csac_0630 nucleic acid binding protein; SPTR: Nucleic acid-binding protein contains PIN domain-like protein.
  
     0.665
EIJ35447.1
Hypothetical protein; PFAM: Domain of unknown function (DUF3368); COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: ter:Tery_4273 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
EIJ35950.1
PFAM: Uncharacterised protein family (UPF0175); KEGG: mar:MAE_43230 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
EIJ34857.1
Hypothetical protein; PFAM: Domain of unknown function (DUF3368); COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: tko:TK0918 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.638
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.554
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.