STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36583.1PFAM: Phosphotransferase enzyme family; Zeta toxin; COGs: COG2187 conserved hypothetical protein; InterPro IPR002575; KEGG: tgr:Tgr7_1406 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SPTR: Putative uncharacterized protein. (524 aa)    
Predicted Functional Partners:
EIJ34102.1
HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR005834; KEGG: gvi:glr3684 hydrolase, CbbY protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Glr3684 protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3.
  
    0.784
EIJ36582.1
KEGG: tgr:Tgr7_1403 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.762
EIJ36579.1
KEGG: tgr:Tgr7_2545 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.753
EIJ36581.1
Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG2867 Oligoketide cyclase/lipid transport protein; InterPro IPR005031; KEGG: tgr:Tgr7_0964 cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; SPTR: Cyclase/dehydrase.
       0.746
EIJ35309.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.733
EIJ36580.1
Protein rnfH; PFAM: Uncharacterised protein family (UPF0125); COGs: COG2914 conserved hypothetical protein; HAMAP: Protein rnfH; InterPro IPR005346; KEGG: app:CAP2UW1_1936 hypothetical protein; PFAM: Uncharacterised protein family UPF0125; SPTR: Protein rnfH 1.
       0.728
EIJ34178.1
PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: mgm:Mmc1_0347 dienelactone hydrolase; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase family.
   
    0.649
EIJ35076.1
KEGG: pap:PSPA7_2475 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.649
EIJ35090.1
Extracellular lipase, Pla-1/cef family; PFAM: Bacterial virulence factor lipase N-terminal; InterPro IPR020009; KEGG: kko:Kkor_0777 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Lipase, Pla-1/cef, extracellular.
   
    0.649
EIJ36584.1
Penicillin-binding protein 1B; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR011813:IPR001264:IPR001460; KEGG: tgr:Tgr7_1407 penicillin-binding protein 1B; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Penicillin-binding protein 1B; TIGRFAM: Penicillin-binding protein 1B.
       0.634
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.