STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36819.1PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: psl:Psta_4279 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Muconate lactonizing enzyme. (370 aa)    
Predicted Functional Partners:
EIJ36818.1
PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR006416:IPR001757:IPR008250:IPR005834; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase; ATPase, P-type, ATPase-associated region; SPTR: Cation transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter.
  
    0.687
EIJ36747.1
PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: dar:Daro_3804 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: 2,4-dihydroxyhept-2-enedioate aldolase.
 
 
 0.647
EIJ36817.1
PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: sno:Snov_0156 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Muconate lactonizing enzyme.
 
    
0.641
EIJ36816.1
Hypothetical protein; PFAM: Taurine catabolism dioxygenase TauD, TfdA family; KEGG: pti:PHATRDRAFT_37038 hypothetical protein; SPTR: Syringomycin synthesis regulator SyrP, putative.
  
    0.576
EIJ36815.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: dao:Desac_2183 Aspartate transaminase; PFAM: Aminotransferase, class I/II; SPTR: Aspartate/tyrosine/aromatic aminotransferase.
       0.575
EIJ36812.1
Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: mci:Mesci_5766 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase domain protein.
 
     0.509
EIJ33582.1
PFAM: FMN-dependent dehydrogenase; COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterPro IPR000262; KEGG: pmy:Pmen_0804 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase; SPTR: FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.487
EIJ33258.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: tgr:Tgr7_2028 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Carbohydrate kinase FGGY.
  
  
 0.452
EIJ36814.1
Pyruvate carboxyltransferase; PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: nda:Ndas_2258 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; SPTR: Pyruvate carboxyltransferase.
     
 0.433
EIJ35391.1
PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR005263:IPR002220; KEGG: tgr:Tgr7_0827 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily.
    
 0.428
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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