STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36848.1PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: amd:AMED_3553 beta-lactamase class C; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase class C. (427 aa)    
Predicted Functional Partners:
EIJ32768.1
PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR004739:IPR001674:IPR000991:IPR018318; KEGG: tgr:Tgr7_1036 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP syntha [...]
     
 0.860
EIJ34160.1
PFAM: Glycosyl hydrolases family 8; Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR001223:IPR002037:IPR003367:IPR011583; KEGG: hch:HCH_04793 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; Glycoside hydrolase, family 8; Thrombospondin, type 3-like repeat; SMART: Chitinase II; SPTR: Chitinase.
     
 0.854
EIJ36854.1
Beta-hexosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; HAMAP: Beta-hexosaminidase; InterPro IPR001764; KEGG: alv:Alvin_0490 glycoside hydrolase family 3 domain-containing protein; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Beta-hexosaminidase.
  
 
 0.703
EIJ36803.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Flavin-binding monooxygenase-like; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027; KEGG: mph:MLP_27150 putative flavin-containing monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative uncharacterized protein.
 
  
  0.617
EIJ34725.1
Hypothetical protein; KEGG: bid:Bind_1772 WD repeat-containing protein; SPTR: Conserved hypothetical WD-repeat protein alr2800.
  
  
  0.610
EIJ34161.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; InterPro IPR000209; KEGG: mar:MAE_12430 hypothetical protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
  
  0.604
EIJ33441.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; InterPro IPR000209:IPR003367; KEGG: mar:MAE_12430 hypothetical protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Thrombospondin, type 3-like repeat; SPTR: Peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
  
  0.598
EIJ36307.1
KEGG: hau:Haur_3960 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase.
 
   
 0.584
EIJ35669.1
Penicillin-binding protein 6; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterPro IPR001967:IPR012907; KEGG: tcx:Tcr_1635 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; SPTR: Penicillin-binding protein 6. Serine peptidase. MEROPS family S11.
     
 0.583
EIJ36823.1
Hypothetical protein; KEGG: dmo:Dmoj_GI21589 GI21589 gene product from transcript GI21589-RA; SPTR: GI21589.
 
 
  0.574
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.