Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ36876.1Chorismate lyase; PFAM: Protein of unknown function (DUF98); COGs: COG3161 4-hydroxybenzoate synthetase (chorismate lyase); InterPro IPR002800; KEGG: cyj:Cyan7822_1179 hypothetical protein; PFAM: Protein of unknown function DUF98; SPTR: Putative uncharacterized protein. (190 aa)    
Predicted Functional Partners:
EIJ32841.1
Chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; COGs: COG0077 Prephenate dehydratase; InterPro IPR010957:IPR020822:IPR001086:IPR002912; KEGG: tgr:Tgr7_1538 chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; SPTR: Chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain.
    
 0.907
EIJ36874.1
Hypothetical protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; KEGG: sur:STAUR_8026 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.887
EIJ36875.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: hoh:Hoch_6526 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: AMP-dependent synthetase and ligase.
 
 
  0.843
EIJ36873.1
PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR010723; KEGG: sur:STAUR_8027 coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase.
 
     0.762
EIJ36879.1
KEGG: cce:Ccel_3232 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.753
EIJ36877.1
Hypothetical protein.
       0.741
EIJ34930.1
PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; putative 4-hydroxybenzoate polyprenyltransferase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; InterPro IPR000537:IPR006370; KEGG: tgr:Tgr7_0128 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase.
    
 0.660
EIJ35983.1
KEGG: cyt:cce_4157 hypothetical protein; SPTR: SxtJ; manually curated.
  
     0.649
EIJ36883.1
PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: ote:Oter_1957 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Band 7 protein.
 
     0.623
EIJ33398.1
PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; InterPro IPR006264:IPR001986; KEGG: tgr:Tgr7_1541 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup.
    
 0.587
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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