Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIJ36948.1Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: slt:Slit_2472 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein. (248 aa)    
Predicted Functional Partners:
EIJ36949.1
Hypothetical protein.
       0.505
EIJ35794.1
Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: pwa:Pecwa_2047 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein.
  
     0.499
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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