close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpu_01130Minor capsid protein E. (338 aa)    
Predicted Functional Partners:
cpu_01160
Hypothetical protein.
 
    0.969
cpu_01100
Phage portal protein.
 
    0.965
cpu_01190
Phage tail protein.
 
    0.959
cpu_01150
Hypothetical protein.
 
     0.956
cpu_01170
Hypothetical protein.
 
     0.956
cpu_01200
Phage tail protein.
 
     0.950
cpu_01080
Terminase.
 
    0.948
cpu_01120
Head decoration protein.
 
    0.943
cpu_01110
Hypothetical protein; Belongs to the peptidase S14 family.
 
     0.914
cpu_01070
Hypothetical protein.
 
  
 0.847
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.