Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cpu_00170 | cpu_03030 | cpu_00170 | cpu_03030 | Glycine radical enzyme activase. | Anaerobic ribonucleoside triphosphate reductase. | 0.561 |
| cpu_00170 | cpu_03040 | cpu_00170 | cpu_03040 | Glycine radical enzyme activase. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.704 |
| cpu_00170 | cpu_05200 | cpu_00170 | cpu_05200 | Glycine radical enzyme activase. | Adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase. | 0.714 |
| cpu_00170 | cpu_14380 | cpu_00170 | cpu_14380 | Glycine radical enzyme activase. | Hypothetical protein. | 0.537 |
| cpu_00170 | cpu_15260 | cpu_00170 | cpu_15260 | Glycine radical enzyme activase. | Alcohol dehydrogenase. | 0.571 |
| cpu_00170 | cpu_20160 | cpu_00170 | cpu_20160 | Glycine radical enzyme activase. | Hypothetical protein. | 0.584 |
| cpu_03030 | cpu_00170 | cpu_03030 | cpu_00170 | Anaerobic ribonucleoside triphosphate reductase. | Glycine radical enzyme activase. | 0.561 |
| cpu_03030 | cpu_03040 | cpu_03030 | cpu_03040 | Anaerobic ribonucleoside triphosphate reductase. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.958 |
| cpu_03030 | cpu_03050 | cpu_03030 | cpu_03050 | Anaerobic ribonucleoside triphosphate reductase. | MBL fold hydrolase. | 0.543 |
| cpu_03030 | cpu_03060 | cpu_03030 | cpu_03060 | Anaerobic ribonucleoside triphosphate reductase. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.618 |
| cpu_03030 | cpu_03070 | cpu_03030 | cpu_03070 | Anaerobic ribonucleoside triphosphate reductase. | DNA-binding response regulator. | 0.618 |
| cpu_03030 | nrdR | cpu_03030 | cpu_03020 | Anaerobic ribonucleoside triphosphate reductase. | NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.854 |
| cpu_03040 | cpu_00170 | cpu_03040 | cpu_00170 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Glycine radical enzyme activase. | 0.704 |
| cpu_03040 | cpu_03030 | cpu_03040 | cpu_03030 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Anaerobic ribonucleoside triphosphate reductase. | 0.958 |
| cpu_03040 | cpu_03050 | cpu_03040 | cpu_03050 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | MBL fold hydrolase. | 0.544 |
| cpu_03040 | cpu_03060 | cpu_03040 | cpu_03060 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.575 |
| cpu_03040 | cpu_03070 | cpu_03040 | cpu_03070 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | DNA-binding response regulator. | 0.543 |
| cpu_03040 | cpu_05200 | cpu_03040 | cpu_05200 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase. | 0.714 |
| cpu_03040 | cpu_14380 | cpu_03040 | cpu_14380 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Hypothetical protein. | 0.511 |
| cpu_03040 | cpu_15260 | cpu_03040 | cpu_15260 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Alcohol dehydrogenase. | 0.521 |
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