Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cpu_03040Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (169 aa)    
Predicted Functional Partners:
cpu_03030
Anaerobic ribonucleoside triphosphate reductase.
 
  
 0.955
nrdR
NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.782
cpu_05200
Adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase.
   
    0.726
cpu_00170
Glycine radical enzyme activase.
  
     0.704
cpu_20160
Hypothetical protein.
 
 
 0.652
cpu_15260
Alcohol dehydrogenase.
 
 
 0.620
cpu_14380
Hypothetical protein.
 
 
 0.612
cpu_03060
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.571
cpu_03050
MBL fold hydrolase.
  
    0.544
cpu_03070
DNA-binding response regulator.
       0.543
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
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