Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpu_04480Cyclase. (226 aa)    
Predicted Functional Partners:
cpu_08810
Pyruvate carboxylase subunit B.
    
  0.859
cpu_04470
L-serine dehydratase, iron-sulfur-dependent subunit alpha.
       0.780
ade-2
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
     0.762
cpu_04460
L-serine dehydratase, iron-sulfur-dependent subunit beta.
       0.762
mtaD
Ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
  
    0.714
cpu_04770
NADH dehydrogenase.
     
  0.686
cpu_21240
Malate dehydrogenase.
     
  0.686
cpu_04240
Isochorismatase.
 
   
 0.642
cpu_20360
Aromatic ring hydroxylase.
  
  
  0.631
cpu_11300
(4Fe-4S)-binding protein.
     
  0.616
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
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