cpu_05400 protein (Carboxydothermus pertinax)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

cpu_05400

DNA internalization-related competence protein ComEC/Rec2. (726 aa)

Predicted Functional Partners:

cpu_05390

0.967

cpu_13430

0.931

cpu_19640

0.928

cpu_05420

0.926

cpu_14710

0.858

cpu_14740

0.836

birA

0.798

cpu_05380

0.795

cpu_14760

0.788

cpu_02470

0.758

Your Current Organism:

Carboxydothermus pertinax

NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
birA	cpu_02470	cpu_17060	cpu_02470	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	single-stranded-DNA-specific exonuclease RecJ.	0.459
birA	cpu_05400	cpu_17060	cpu_05400	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	DNA internalization-related competence protein ComEC/Rec2.	0.798
cpu_02470	birA	cpu_02470	cpu_17060	single-stranded-DNA-specific exonuclease RecJ.	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.459
cpu_02470	cpu_05400	cpu_02470	cpu_05400	single-stranded-DNA-specific exonuclease RecJ.	DNA internalization-related competence protein ComEC/Rec2.	0.758
cpu_02470	cpu_13430	cpu_02470	cpu_13430	single-stranded-DNA-specific exonuclease RecJ.	Competence protein.	0.421
cpu_02470	cpu_19640	cpu_02470	cpu_19640	single-stranded-DNA-specific exonuclease RecJ.	DNA processing protein DprA.	0.467
cpu_05380	cpu_05390	cpu_05380	cpu_05390	Rrf2 family protein.	Competence protein.	0.782
cpu_05380	cpu_05400	cpu_05380	cpu_05400	Rrf2 family protein.	DNA internalization-related competence protein ComEC/Rec2.	0.795
cpu_05380	cpu_05420	cpu_05380	cpu_05420	Rrf2 family protein.	DNA polymerase III subunit delta.	0.635
cpu_05390	cpu_05380	cpu_05390	cpu_05380	Competence protein.	Rrf2 family protein.	0.782
cpu_05390	cpu_05400	cpu_05390	cpu_05400	Competence protein.	DNA internalization-related competence protein ComEC/Rec2.	0.967
cpu_05390	cpu_05420	cpu_05390	cpu_05420	Competence protein.	DNA polymerase III subunit delta.	0.733
cpu_05390	cpu_13430	cpu_05390	cpu_13430	Competence protein.	Competence protein.	0.526
cpu_05390	cpu_14710	cpu_05390	cpu_14710	Competence protein.	Prepilin peptidase.	0.750
cpu_05390	cpu_14740	cpu_05390	cpu_14740	Competence protein.	Pilus assembly protein PilC.	0.808
cpu_05390	cpu_14760	cpu_05390	cpu_14760	Competence protein.	Type II secretion system protein E.	0.797
cpu_05390	cpu_19640	cpu_05390	cpu_19640	Competence protein.	DNA processing protein DprA.	0.439
cpu_05400	birA	cpu_05400	cpu_17060	DNA internalization-related competence protein ComEC/Rec2.	biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.798
cpu_05400	cpu_02470	cpu_05400	cpu_02470	DNA internalization-related competence protein ComEC/Rec2.	single-stranded-DNA-specific exonuclease RecJ.	0.758
cpu_05400	cpu_05380	cpu_05400	cpu_05380	DNA internalization-related competence protein ComEC/Rec2.	Rrf2 family protein.	0.795