STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpu_06910Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (723 aa)    
Predicted Functional Partners:
cpu_06920
4Fe-4S ferredoxin.
 0.988
cpu_17430
Sulfite reductase, dissimilatory-type subunit alpha.
     
 0.945
cpu_06930
Molybdopterin oxidoreductase membrane subunit.
 
  
 0.905
cpu_02750
Molybdopterin oxidoreductase.
 
 0.878
cpu_03880
4Fe-4S ferredoxin.
  0.871
cpu_12450
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.871
cpu_17420
Sulfite reductase, dissimilatory-type beta subunit.
     
 0.866
cpu_06940
Hypothetical protein.
 
 0.856
cpu_02740
4Fe-4S ferredoxin.
  0.851
cpu_03890
Molybdopterin oxidoreductase.
 
 0.835
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.