cpu_07640 protein (Carboxydothermus pertinax)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

cpu_07640

Hypothetical protein. (268 aa)

Predicted Functional Partners:

cpu_09260

0.671

cpu_04180

0.617

cpu_01910

0.600

cpu_14120

0.549

cpu_05690

0.524

cpu_02440

0.520

cpu_07620

0.517

cpu_07630

0.517

rsmH

0.481

acpP

0.466

Your Current Organism:

Carboxydothermus pertinax

NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acpP	cpu_01910	cpu_21990	cpu_01910	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	MBL fold metallo-hydrolase.	0.466
acpP	cpu_02440	cpu_21990	cpu_02440	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	MBL fold metallo-hydrolase.	0.466
acpP	cpu_04180	cpu_21990	cpu_04180	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	MBL fold hydrolase.	0.466
acpP	cpu_07640	cpu_21990	cpu_07640	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Hypothetical protein.	0.466
acpP	cpu_09260	cpu_21990	cpu_09260	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Rhodanese-like domain-containing protein.	0.759
acpP	cpu_14120	cpu_21990	cpu_14120	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carbohydrate kinase.	0.462
acpP	rsmH	cpu_21990	cpu_02770	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.727
cpu_01910	acpP	cpu_01910	cpu_21990	MBL fold metallo-hydrolase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.466
cpu_01910	cpu_07640	cpu_01910	cpu_07640	MBL fold metallo-hydrolase.	Hypothetical protein.	0.600
cpu_01910	cpu_09260	cpu_01910	cpu_09260	MBL fold metallo-hydrolase.	Rhodanese-like domain-containing protein.	0.588
cpu_01910	cpu_14120	cpu_01910	cpu_14120	MBL fold metallo-hydrolase.	Carbohydrate kinase.	0.466
cpu_01910	rsmH	cpu_01910	cpu_02770	MBL fold metallo-hydrolase.	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.406
cpu_02440	acpP	cpu_02440	cpu_21990	MBL fold metallo-hydrolase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.466
cpu_02440	cpu_05690	cpu_02440	cpu_05690	MBL fold metallo-hydrolase.	FAD-binding oxidoreductase.	0.524
cpu_02440	cpu_07640	cpu_02440	cpu_07640	MBL fold metallo-hydrolase.	Hypothetical protein.	0.520
cpu_02440	cpu_09260	cpu_02440	cpu_09260	MBL fold metallo-hydrolase.	Rhodanese-like domain-containing protein.	0.671
cpu_02440	cpu_14120	cpu_02440	cpu_14120	MBL fold metallo-hydrolase.	Carbohydrate kinase.	0.466
cpu_02440	rsmH	cpu_02440	cpu_02770	MBL fold metallo-hydrolase.	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.414
cpu_04180	acpP	cpu_04180	cpu_21990	MBL fold hydrolase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.466
cpu_04180	cpu_07640	cpu_04180	cpu_07640	MBL fold hydrolase.	Hypothetical protein.	0.617