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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpu_10550Putative protein MJ1066; Belongs to the DegT/DnrJ/EryC1 family. (380 aa)    
Predicted Functional Partners:
cpu_24710
Sugar transferase.
 
 
 0.995
cpu_10540
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
 
 
 0.993
cpu_10580
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase.
 
 
 0.968
cpu_10590
Pseudaminic acid synthase.
 
  
 0.966
cpu_10570
Pseudaminic acid biosynthesis-associated protein PseG.
 
  
 0.964
cpu_10560
Putative protein MJ1063.
 
  
 0.962
cpu_10510
Hypothetical protein.
 
  
 0.810
cpu_10530
Hypothetical protein.
 
  
 0.803
cpu_00580
Acetyltransferase.
  
 
 0.746
cpu_07110
UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.727
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
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