STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpu_11360Aldehyde ferredoxin oxidoreductase. (241 aa)    
Predicted Functional Partners:
cpu_11370
Aldehyde ferredoxin oxidoreductase.
 
     0.920
cpu_11340
Molybdopterin synthase sulfur carrier subunit.
 
  
  0.842
cpu_11250
Molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.720
cpu_11350
Tungsten cofactor oxidoreductase radical SAM maturase.
 
     0.714
cpu_02030
Tungsten ABC transporter substrate-binding protein.
 
   
 0.673
cpu_11330
Hypothetical protein.
 
     0.666
cpu_11300
(4Fe-4S)-binding protein.
  
  0.586
cpu_20570
(Fe-S)-binding protein.
 
  0.551
cpu_02040
ABC transporter permease.
 
     0.524
cpu_06920
4Fe-4S ferredoxin.
  
  0.477
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
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