STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpu_17830Hypothetical protein. (64 aa)    
Predicted Functional Partners:
cpu_10190
Haloacid dehalogenase.
  
  
 0.856
cpu_17820
Peptidase.
  
 
 0.802
cpu_17850
Transcriptional repressor; Belongs to the Fur family.
  
  
 0.786
cpu_17840
Hypothetical protein.
       0.773
cpu_10180
Heavy metal-binding domain-containing protein.
  
  
 0.693
cpu_17860
Hypothetical protein.
       0.658
cpu_17870
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.580
cpu_17880
Hypothetical protein.
       0.433
crcB
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.433
crcB-2
Chromosome condensation protein CcrB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.433
Your Current Organism:
Carboxydothermus pertinax
NCBI taxonomy Id: 870242
Other names: C. pertinax, Carboxydothermus pertinax Yoneda et al. 2012, Carboxydothermus sp. Ug1, DSM 23698, NBRC 107576, strain Ug1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.