A0A0C3IMX2 protein (Pisolithus tinctorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3IMX2

Uncharacterized protein. (421 aa)

Predicted Functional Partners:

A0A0C3N3Q5

0.801

A0A0C3JYR8

0.781

A0A0C3IRR0

0.717

A0A0C3P2W5

0.682

A0A0C3J5C3

0.660

A0A0C3JE22

0.655

A0A0C3N4B4

0.655

A0A0C3N4K9

0.655

A0A0C3JY49

0.635

A0A0C3PWV9

0.629

Your Current Organism:

Pisolithus tinctorius

NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3IMX2	A0A0C3IRR0	Uncharacterized protein.	BUD22 domain-containing protein.	0.717
A0A0C3IMX2	A0A0C3J5C3	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A0C3IMX2	A0A0C3JE22	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A0C3IMX2	A0A0C3JY49	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.635
A0A0C3IMX2	A0A0C3JYR8	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.781
A0A0C3IMX2	A0A0C3N3Q5	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0C3IMX2	A0A0C3N4B4	Uncharacterized protein.	Thioesterase domain-containing protein.	0.655
A0A0C3IMX2	A0A0C3N4K9	Uncharacterized protein.	KR domain-containing protein.	0.655
A0A0C3IMX2	A0A0C3P2W5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.682
A0A0C3IMX2	A0A0C3PWV9	Uncharacterized protein.	FSH1 domain-containing protein.	0.629
A0A0C3IRR0	A0A0C3IMX2	BUD22 domain-containing protein.	Uncharacterized protein.	0.717
A0A0C3J5C3	A0A0C3IMX2	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A0C3J5C3	A0A0C3JY49	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.692
A0A0C3J5C3	A0A0C3JYR8	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.953
A0A0C3J5C3	A0A0C3N3Q5	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0C3J5C3	A0A0C3P2W5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.539
A0A0C3JE22	A0A0C3IMX2	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A0C3JE22	A0A0C3N4B4	Uncharacterized protein.	Thioesterase domain-containing protein.	0.836
A0A0C3JE22	A0A0C3P2W5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.545
A0A0C3JE22	A0A0C3PWV9	Uncharacterized protein.	FSH1 domain-containing protein.	0.534