STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3IRU5Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)    
Predicted Functional Partners:
A0A0C3J679
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.997
A0A0C3P3Y2
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
 0.997
A0A0C3P5H3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.997
A0A0C3P9E0
Uncharacterized protein.
   
 
 0.997
A0A0C3PHV4
KOW domain-containing protein.
  
 0.997
A0A0C3PUM8
Uncharacterized protein.
  
 0.997
A0A0C3PVV7
Ribosomal_L18_c domain-containing protein.
  
 0.997
A0A0C3JF45
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.996
A0A0C3JH02
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.996
A0A0C3JK01
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.