Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3JB23Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
A0A0C3N5K6
ULP_PROTEASE domain-containing protein.
   
 0.745
A0A0C3P530
Ipi1_N domain-containing protein.
    
 0.696
A0A0C3PHD6
WD_REPEATS_REGION domain-containing protein.
    
  0.696
A0A0C3PRA9
Uncharacterized protein.
    
  0.661
A0A0C3P8Z7
Uncharacterized protein.
   
   0.650
A0A0C3NSL0
CLP1_P domain-containing protein.
    
  0.645
A0A0C3JX87
Uncharacterized protein.
   
 
 0.623
A0A0C3JP30
Ubiquitin-like domain-containing protein.
    
 0.613
A0A0C3NDI0
Ubiquitin-like domain-containing protein.
    
 0.613
A0A0C3NIW6
Ubiquitin-like domain-containing protein.
    
 0.613
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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