Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3JBZ7Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
M404DRAFT_9030
Nop domain-containing protein.
   
 0.983
M404DRAFT_9629
Nop domain-containing protein.
   
 0.983
A0A0C3PUN3
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.973
A0A0C3JQZ9
U3 small nucleolar RNA-associated protein 22.
   
 0.967
A0A0C3PVX0
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.962
A0A0C3JVS7
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.950
A0A0C3NNH0
WD_REPEATS_REGION domain-containing protein.
   
 0.945
A0A0C3NZW9
Uncharacterized protein.
   
 0.943
A0A0C3PFX2
Utp12 domain-containing protein.
   
 0.943
A0A0C3JVI8
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.941
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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