STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3JIM7tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (518 aa)    
Predicted Functional Partners:
A0A0C3PH52
Ribosomal_L7Ae domain-containing protein.
   
 0.986
A0A0C3P244
Uncharacterized protein.
   
 0.985
A0A0C3P5H3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.985
A0A0C3PFV2
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.984
A0A0C3JQY8
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.983
A0A0C3KNR5
Uncharacterized protein.
   
 0.983
A0A0C3PDE4
Uncharacterized protein.
  
 0.982
A0A0C3KJI7
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.980
A0A0C3PEF2
Uncharacterized protein.
   
 0.980
A0A0C3PVV7
Ribosomal_L18_c domain-containing protein.
   
 0.979
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.