STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3JYF9SAGA-associated factor 11. (289 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.990
A0A0C3PG47
SCA7 domain-containing protein.
    
 0.990
A0A0C3PNM0
TFIID_20kDa domain-containing protein.
    
 0.985
A0A0C3NGB7
Ubiquitin carboxyl-terminal hydrolase.
    
 0.984
A0A0C3NRE1
Uncharacterized protein.
    
 0.982
M404DRAFT_8994
Uncharacterized protein.
    
 0.982
A0A0C3KTW3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.981
A0A0C3KFL4
WD_REPEATS_REGION domain-containing protein.
   
 0.976
A0A0C3PE93
SGF29 C-terminal domain-containing protein.
    
 0.976
A0A0C3KTI0
Uncharacterized protein.
    
 0.971
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.