STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3JYK0Uncharacterized protein; Belongs to the DEAD box helicase family. (548 aa)    
Predicted Functional Partners:
A0A0C3K0G9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
A0A0C3PEC6
Sas10 domain-containing protein.
   
 0.999
A0A0C3PJT1
Uncharacterized protein.
   
 0.999
A0A0C3KQB2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
A0A0C3KVJ2
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.996
A0A0C3PQL1
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A0C3PTF7
Uncharacterized protein.
   
 
 0.996
A0A0C3PG38
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.995
A0A0C3KFW9
Uncharacterized protein.
   
 
 0.993
A0A0C3KVB0
CBF domain-containing protein.
   
 0.993
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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