STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3KBD8Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)    
Predicted Functional Partners:
A0A0C3NVU0
PSP domain-containing protein.
    
 0.999
A0A0C3PME9
CPSF_A domain-containing protein.
   
 0.999
A0A0C3PPM1
Uncharacterized protein.
   
 0.999
A0A0C3PTR1
RRM domain-containing protein.
   
 0.999
A0A0C3P5L8
Matrin-type domain-containing protein.
   
 0.996
A0A0C3PFZ7
Uncharacterized protein.
    
 0.996
A0A0C3JXW7
Small nuclear ribonucleoprotein Sm D2.
   
 0.995
A0A0C3PUU9
U1-type domain-containing protein.
   
 0.995
A0A0C3NN76
Uncharacterized protein.
   
 0.994
A0A0C3PHK4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.992
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.