A0A0C3KD27 protein (Pisolithus tinctorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3KD27

AAA domain-containing protein. (479 aa)

Predicted Functional Partners:

A0A0C3J4Q9

0.913

A0A0C3IZY7

0.854

A0A0C3J6P1

0.854

A0A0C3N805

0.854

A0A0C3PC07

0.854

A0A0C3KUH2

0.806

A0A0C3PP75

0.724

A0A0C3P3Z2

0.712

A0A0C3J954

0.677

A0A0C3JNX3

0.677

Your Current Organism:

Pisolithus tinctorius

NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3IZY7	A0A0C3J4Q9	3'-5' exonuclease domain-containing protein.	RING-type domain-containing protein.	0.703
A0A0C3IZY7	A0A0C3J6P1	3'-5' exonuclease domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.732
A0A0C3IZY7	A0A0C3J954	3'-5' exonuclease domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.953
A0A0C3IZY7	A0A0C3JNX3	3'-5' exonuclease domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.953
A0A0C3IZY7	A0A0C3KD27	3'-5' exonuclease domain-containing protein.	AAA domain-containing protein.	0.854
A0A0C3IZY7	A0A0C3KUH2	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.787
A0A0C3IZY7	A0A0C3N805	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.727
A0A0C3IZY7	A0A0C3P3Z2	3'-5' exonuclease domain-containing protein.	DNA polymerase.	0.848
A0A0C3IZY7	A0A0C3PC07	3'-5' exonuclease domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.757
A0A0C3IZY7	A0A0C3PP75	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.995
A0A0C3J4Q9	A0A0C3IZY7	RING-type domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.703
A0A0C3J4Q9	A0A0C3J6P1	RING-type domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.703
A0A0C3J4Q9	A0A0C3J954	RING-type domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.982
A0A0C3J4Q9	A0A0C3JNX3	RING-type domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.982
A0A0C3J4Q9	A0A0C3KD27	RING-type domain-containing protein.	AAA domain-containing protein.	0.913
A0A0C3J4Q9	A0A0C3KUH2	RING-type domain-containing protein.	Uncharacterized protein.	0.843
A0A0C3J4Q9	A0A0C3N805	RING-type domain-containing protein.	Uncharacterized protein.	0.703
A0A0C3J4Q9	A0A0C3P3Z2	RING-type domain-containing protein.	DNA polymerase.	0.910
A0A0C3J4Q9	A0A0C3PC07	RING-type domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.703
A0A0C3J6P1	A0A0C3IZY7	3'-5' exonuclease domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.732