STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3KV45Helicase ATP-binding domain-containing protein. (794 aa)    
Predicted Functional Partners:
A0A0C3JLA7
Uncharacterized protein.
    
 0.999
A0A0C3JZX9
Uncharacterized protein.
   
 0.999
A0A0C3K3M6
RING-type domain-containing protein.
    
 0.999
A0A0C3K4B0
BSD domain-containing protein.
    
 0.999
A0A0C3KK47
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.999
A0A0C3PKT0
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.999
A0A0C3PCN4
Uncharacterized protein.
    
 0.998
A0A0C3JFB3
TFIIE beta domain-containing protein.
    
 0.995
A0A0C3JY57
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.995
A0A0C3IZL7
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.994
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.