STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3MVA5Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
A0A0C3PIM4
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.835
A0A0C3PFA2
Uncharacterized protein.
   
 0.817
A0A0C3NEJ2
Uncharacterized protein.
  
0.735
A0A0C3PW15
Uncharacterized protein.
  
 
0.716
A0A0C3J634
Uncharacterized protein.
  
 
 
0.684
A0A0C3NGB6
Uncharacterized protein.
    
 0.681
A0A0C3PIC0
Uncharacterized protein.
  
 
0.671
A0A0C3JNT1
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.660
A0A0C3PZK1
Uncharacterized protein; Belongs to the actin family.
   
 
 0.659
A0A0C3KWU0
Uncharacterized protein.
   
 
  0.651
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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