STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3NFX5Rhodanese domain-containing protein. (336 aa)    
Predicted Functional Partners:
A0A0C3JEL6
Uncharacterized protein.
   
 0.634
A0A0C3JTW2
Uncharacterized protein.
   
 0.634
A0A0C3PGF5
Uncharacterized protein.
   
 0.634
A0A0C3PHC4
Uncharacterized protein.
   
 0.634
A0A0C3PPI4
Uncharacterized protein.
   
 0.634
A0A0C3IXP2
Plug_translocon domain-containing protein.
    
 
 0.632
A0A0C3JSN6
Uncharacterized protein.
   
 0.632
A0A0C3J4W0
Uncharacterized protein.
     
 0.627
A0A0C3PHI4
Uncharacterized protein.
     
 0.627
A0A0C3PIR5
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
  0.621
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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