STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3NQS2Reverse transcriptase domain-containing protein. (570 aa)    
Predicted Functional Partners:
A0A0C3I8X1
Uncharacterized protein.
 
     0.945
A0A0C3ND24
Uncharacterized protein.
 
     0.943
A0A0C3IQ44
Uncharacterized protein.
 
     0.862
A0A0C3NCS8
Uncharacterized protein.
 
    
0.749
A0A0C3PWI4
Uncharacterized protein.
    
  0.607
A0A0C3PW92
ERCC4 domain-containing protein.
    
  0.581
A0A0C3JPF6
Integrase catalytic domain-containing protein.
 
     0.578
A0A0C3PX69
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.552
A0A0C3PYN5
Uncharacterized protein.
    
  0.552
A0A0C3KCQ1
Uncharacterized protein.
 
    
0.547
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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