STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3NYJ8RRM domain-containing protein. (475 aa)    
Predicted Functional Partners:
A0A0C3JLT4
Uncharacterized protein.
   
 0.958
A0A0C3IGJ6
Uncharacterized protein.
   
 0.929
A0A0C3PL46
RRM domain-containing protein.
   
 0.916
A0A0C3JXW7
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.915
A0A0C3PHK4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.914
A0A0C3JV45
Sm domain-containing protein.
   
 
 0.912
A0A0C3KYW2
KH domain-containing protein.
   
 
 0.900
A0A0C3PME9
CPSF_A domain-containing protein.
   
 0.899
A0A0C3PPM1
Uncharacterized protein.
   
 
 0.886
A0A0C3PTR1
RRM domain-containing protein.
   
 
 0.885
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.