A0A0C3P2U7 protein (Pisolithus tinctorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3P2U7

Uncharacterized protein; Belongs to the DEAD box helicase family. (591 aa)

Predicted Functional Partners:

A0A0C3KEY5

0.979

A0A0C3NM18

0.967

A0A0C3NQG7

0.967

NOP7

0.963

A0A0C3J6B6

0.963

M404DRAFT_7281

0.963

A0A0C3K0G9

0.958

A0A0C3JYT8

0.956

M404DRAFT_9629

0.951

ERB1

0.951

Your Current Organism:

Pisolithus tinctorius

NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0C3J6B6	A0A0C3JYT8	A0A0C3J6B6	A0A0C3JYT8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.994
A0A0C3J6B6	A0A0C3K0G9	A0A0C3J6B6	A0A0C3K0G9	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.758
A0A0C3J6B6	A0A0C3KEY5	A0A0C3J6B6	A0A0C3KEY5	Uncharacterized protein.	PUA domain-containing protein.	0.934
A0A0C3J6B6	A0A0C3NM18	A0A0C3J6B6	A0A0C3NM18	Uncharacterized protein.	CP-type G domain-containing protein.	0.985
A0A0C3J6B6	A0A0C3NQG7	A0A0C3J6B6	A0A0C3NQG7	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A0C3J6B6	A0A0C3P2U7	A0A0C3J6B6	A0A0C3P2U7	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.963
A0A0C3J6B6	ERB1	A0A0C3J6B6	A0A0C3PFR7	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.995
A0A0C3J6B6	M404DRAFT_9629	A0A0C3J6B6	A0A0C3P6W3	Uncharacterized protein.	Nop domain-containing protein.	0.923
A0A0C3JYT8	A0A0C3J6B6	A0A0C3JYT8	A0A0C3J6B6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
A0A0C3JYT8	A0A0C3K0G9	A0A0C3JYT8	A0A0C3K0G9	WD_REPEATS_REGION domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.741
A0A0C3JYT8	A0A0C3KEY5	A0A0C3JYT8	A0A0C3KEY5	WD_REPEATS_REGION domain-containing protein.	PUA domain-containing protein.	0.954
A0A0C3JYT8	A0A0C3NM18	A0A0C3JYT8	A0A0C3NM18	WD_REPEATS_REGION domain-containing protein.	CP-type G domain-containing protein.	0.994
A0A0C3JYT8	A0A0C3NQG7	A0A0C3JYT8	A0A0C3NQG7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
A0A0C3JYT8	A0A0C3P2U7	A0A0C3JYT8	A0A0C3P2U7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.956
A0A0C3JYT8	ERB1	A0A0C3JYT8	A0A0C3PFR7	WD_REPEATS_REGION domain-containing protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
A0A0C3JYT8	M404DRAFT_7281	A0A0C3JYT8	A0A0C3JPW9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
A0A0C3JYT8	M404DRAFT_9629	A0A0C3JYT8	A0A0C3P6W3	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.961
A0A0C3JYT8	NOP7	A0A0C3JYT8	A0A0C3IZK5	WD_REPEATS_REGION domain-containing protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.994
A0A0C3K0G9	A0A0C3J6B6	A0A0C3K0G9	A0A0C3J6B6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.758
A0A0C3K0G9	A0A0C3JYT8	A0A0C3K0G9	A0A0C3JYT8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD_REPEATS_REGION domain-containing protein.	0.741