A0A0C3P5F0 protein (Pisolithus tinctorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3P5F0

Uncharacterized protein. (428 aa)

Predicted Functional Partners:

A0A0C3PYY0

0.989

A0A0C3PJR7

0.986

A0A0C3JFE9

0.985

A0A0C3N2B5

0.985

A0A0C3P5S8

0.983

A0A0C3IRU5

0.982

A0A0C3JX62

0.982

A0A0C3JWG2

0.980

A0A0C3PWZ7

0.980

A0A0C3NTC7

0.976

Your Current Organism:

Pisolithus tinctorius

NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3IRU5	A0A0C3JFE9	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Protein MAK16; Belongs to the MAK16 family.	0.986
A0A0C3IRU5	A0A0C3JWG2	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Brix domain-containing protein.	0.988
A0A0C3IRU5	A0A0C3JX62	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	TRASH domain-containing protein.	0.994
A0A0C3IRU5	A0A0C3N2B5	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.988
A0A0C3IRU5	A0A0C3NTC7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Brix domain-containing protein.	0.948
A0A0C3IRU5	A0A0C3P5F0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.982
A0A0C3IRU5	A0A0C3P5S8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.989
A0A0C3IRU5	A0A0C3PJR7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.991
A0A0C3IRU5	A0A0C3PWZ7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized protein.	0.986
A0A0C3IRU5	A0A0C3PYY0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	RRM domain-containing protein.	0.991
A0A0C3JFE9	A0A0C3IRU5	Protein MAK16; Belongs to the MAK16 family.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.986
A0A0C3JFE9	A0A0C3JWG2	Protein MAK16; Belongs to the MAK16 family.	Brix domain-containing protein.	0.985
A0A0C3JFE9	A0A0C3JX62	Protein MAK16; Belongs to the MAK16 family.	TRASH domain-containing protein.	0.988
A0A0C3JFE9	A0A0C3N2B5	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.990
A0A0C3JFE9	A0A0C3NTC7	Protein MAK16; Belongs to the MAK16 family.	Brix domain-containing protein.	0.979
A0A0C3JFE9	A0A0C3P5F0	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.985
A0A0C3JFE9	A0A0C3P5S8	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.989
A0A0C3JFE9	A0A0C3PJR7	Protein MAK16; Belongs to the MAK16 family.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.987
A0A0C3JFE9	A0A0C3PWZ7	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.984
A0A0C3JFE9	A0A0C3PYY0	Protein MAK16; Belongs to the MAK16 family.	RRM domain-containing protein.	0.991