A0A0C3P9S5 protein (Pisolithus tinctorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3P9S5

Uncharacterized protein. (172 aa)

Predicted Functional Partners:

A0A0C3P1H4

0.856

A0A0C3IHW8

0.736

A0A0C3KT23

0.712

A0A0C3PI64

0.707

A0A0C3PJT1

0.671

A0A0C3JWX8

0.669

A0A0C3KU96

0.669

A0A0C3PU52

0.668

A0A0C3JF09

0.659

A0A0C3PI44

0.658

Your Current Organism:

Pisolithus tinctorius

NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3IHW8	A0A0C3P1H4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.727
A0A0C3IHW8	A0A0C3P9S5	Uncharacterized protein.	Uncharacterized protein.	0.736
A0A0C3JF09	A0A0C3JWX8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.979
A0A0C3JF09	A0A0C3KT23	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.983
A0A0C3JF09	A0A0C3KU96	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal_L18e/L15P domain-containing protein.	0.986
A0A0C3JF09	A0A0C3P9S5	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.659
A0A0C3JF09	A0A0C3PI44	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.945
A0A0C3JF09	A0A0C3PI64	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	HMA domain-containing protein.	0.784
A0A0C3JF09	A0A0C3PJT1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
A0A0C3JF09	A0A0C3PU52	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.991
A0A0C3JWX8	A0A0C3JF09	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.979
A0A0C3JWX8	A0A0C3KT23	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.991
A0A0C3JWX8	A0A0C3KU96	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Ribosomal_L18e/L15P domain-containing protein.	0.998
A0A0C3JWX8	A0A0C3P9S5	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.669
A0A0C3JWX8	A0A0C3PI44	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.948
A0A0C3JWX8	A0A0C3PI64	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	HMA domain-containing protein.	0.782
A0A0C3JWX8	A0A0C3PJT1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.987
A0A0C3JWX8	A0A0C3PU52	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein.	0.997
A0A0C3KT23	A0A0C3JF09	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.983
A0A0C3KT23	A0A0C3JWX8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.991