STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3PLX2Uncharacterized protein. (914 aa)    
Predicted Functional Partners:
A0A0C3PYY0
RRM domain-containing protein.
   
 
 0.990
A0A0C3P086
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.989
A0A0C3P362
CBF domain-containing protein.
   
 
 0.989
A0A0C3PC18
RRM domain-containing protein.
   
 
 0.988
A0A0C3PIB4
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.988
A0A0C3JK01
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.987
A0A0C3PP19
NUC173 domain-containing protein.
   
 
 0.987
A0A0C3PXQ3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.987
A0A0C3PD57
PUM-HD domain-containing protein.
   
 
 0.986
A0A0C3JZG2
Uncharacterized protein.
   
 
 0.985
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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