STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3PN25Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (489 aa)    
Predicted Functional Partners:
A0A0C3PTY2
TRUD domain-containing protein.
    
 
 0.955
A0A0C3PJ80
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.933
A0A0C3P524
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.924
A0A0C3PJD8
G domain-containing protein.
   
 
 0.923
A0A0C3PHV4
KOW domain-containing protein.
   
   0.921
A0A0C3PT73
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
   0.919
A0A0C3JWX8
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.918
A0A0C3MWU9
Uncharacterized protein.
    
 
 0.918
A0A0C3KU96
Ribosomal_L18e/L15P domain-containing protein.
   
   0.916
A0A0C3P384
L51_S25_CI-B8 domain-containing protein.
   
   0.913
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.