STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3PYK6tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. (306 aa)    
Predicted Functional Partners:
A0A0C3PHT8
WD_REPEATS_REGION domain-containing protein.
   
   0.724
A0A0C3P9E6
UPF0020 domain-containing protein.
   
  
 0.704
A0A0C3KJI7
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.674
A0A0C3PEC6
Sas10 domain-containing protein.
   
    0.599
M404DRAFT_9636
Uncharacterized protein.
   
    0.569
A0A0C3PH12
Brix domain-containing protein.
   
    0.565
A0A0C3KMY3
Brix domain-containing protein.
   
    0.558
A0A0C3KVB0
CBF domain-containing protein.
   
    0.557
A0A0C3NLY0
PseudoU_synth_1 domain-containing protein.
  
 
 0.556
A0A0C3NXA7
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.553
Your Current Organism:
Pisolithus tinctorius
NCBI taxonomy Id: 870435
Other names: P. tinctorius Marx 270, Pisolithus tinctorius ATCC MYA-4688, Pisolithus tinctorius Marx 270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.