STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH85343.1Glycosyltransferase involved in cell wall bisynthesis. (316 aa)    
Predicted Functional Partners:
SHH54579.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.749
SHH85372.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.712
SHH85107.1
Glycosyltransferase, GT2 family; Partial gene; manually curated.
 
 
 0.644
SHH85399.1
Membrane protein YfhO.
  
 
  0.602
SHH86330.1
Glycosyl transferases group 1; Partial gene; manually curated.
 
 
 0.479
SHH85663.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  
  0.462
SHH47154.1
Dolichol-phosphate mannosyltransferase.
  
  
 
0.458
SHH85318.1
Hypothetical protein.
       0.438
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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