STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH85425.1Glycosyltransferase involved in cell wall bisynthesis. (381 aa)    
Predicted Functional Partners:
SHG85708.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
    0.922
SHH85534.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.859
SHH54412.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
    0.851
SHH85483.1
Sulfotransferase domain-containing protein.
   
   0.798
SHH85510.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.792
SHH85450.1
Methyltransferase domain-containing protein.
       0.773
SHG97262.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
    0.729
SHG97309.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
    0.606
SHH85694.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.533
SHH85559.1
Hypothetical protein.
       0.465
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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