STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG27511.1Ornithine-acyl[acyl carrier protein] N-acyltransferase. (257 aa)    
Predicted Functional Partners:
SHG27541.1
Lyso-ornithine lipid acyltransferase.
 
  
 0.983
SHG27476.1
Protein of unknown function.
 
     0.745
SHG27444.1
Histidine phosphotransferase ChpT.
       0.613
rpsB
SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
       0.446
SHH27699.1
Molybdopterin synthase subunit MoaD.
  
     0.420
SHH47333.1
DNA-binding transcriptional regulator, MarR family.
  
     0.414
SHH28505.1
Thiol-disulfide interchange protein, contains DsbC and DsbD domains.
  
     0.400
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.